Genomic variant #0000010176

Individual ID 00016566
Chromosome 16
Allele Parent #2
Affects function (as reported) Does not affect function
Affects function (by curator) Does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.2134982_2134984del
Reference -
DB-ID TSC2_000085 See all 19 reported entries
dbSNP ID rs137854239
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.0033
Allele Count 19
Allele Number 5752
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSC2 NM_000548.3 -/- - c.4524_4526del r.(?) p.(Phe1510del)
TSC2 NM_001077183.1 -/- - c.4323_4325del r.(?) p.(Phe1443del)
TSC2 NM_001114382.1 -/- - c.4455_4457del r.(?) p.(Phe1487del)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000000269 DNA SEQ-NG-I 1 - 10 Despoina Kalfakakou