Genomic variant #0000019189

Individual ID 00016897
Chromosome 16
Allele Parent #2
Affects function (as reported) Probably does not affect function
Affects function (by curator) Probably does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.2138663_2138666del
Reference -
DB-ID TSC2_000007 See all 7 reported entries
dbSNP ID rs137854184
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00139
Allele Count 8
Allele Number 5752
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSC2 NM_000548.3 -?/-? - c.*52_*55del r.(=) p.(=)
TSC2 NM_001077183.1 -?/-? - c.*52_*55del r.(=) p.(=)
TSC2 NM_001114382.1 -?/-? - c.*52_*55del r.(=) p.(=)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000000640 DNA SEQ-NG-I 1 - 15 Despoina Kalfakakou