Genomic variant #0000019853

Individual ID 00020038
Chromosome 16
Allele Parent #2
Affects function (as reported) Does not affect function
Affects function (by curator) Does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.2133701G>A
Reference -
DB-ID TSC2_000071 See all 9 reported entries
dbSNP ID rs45517319
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00156
Allele Count 9
Allele Number 5752
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSC2 NM_000548.3 -/- - c.3889G>A r.(?) p.(Ala1297Thr)
TSC2 NM_001077183.1 -/- - c.3688G>A r.(?) p.(Ala1230Thr)
TSC2 NM_001114382.1 -/- - c.3820G>A r.(?) p.(Ala1274Thr)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000000688 DNA SEQ-NG-I 1 - 12 Despoina Kalfakakou