Genomic variant #0000022828

Individual ID 00017290
Chromosome 22
Allele Parent #2
Affects function (as reported) Affects function
Affects function (by curator) Affects function
DNA change (genomic) (Relative to hg19 / GRCh37) g.29091769del
Reference -
DB-ID CHEK2_000041 See all 3 reported entries
dbSNP ID rs753159426
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00052
Allele Count 3
Allele Number 5800
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CHEK2 NM_001005735.1 +/+ - c.1317del r.(?) p.(Val440Phefs*17)
CHEK2 NM_001257387.1 +/+ - c.525del r.(?) p.(Val176Phefs*17)
CHEK2 NM_007194.3 +/+ - c.1188del r.(?) p.(Val397Phefs*17)
CHEK2 NM_145862.2 +/+ - c.1101del r.(?) p.(Val368Phefs*17)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000000959 DNA SEQ-NG-I 1 - 12 Despoina Kalfakakou