Genomic variant #0000023101

Individual ID 00017325
Chromosome 16
Allele Parent #2
Affects function (as reported) Effect unknown
Affects function (by curator) Effect unknown
DNA change (genomic) (Relative to hg19 / GRCh37) g.2138492C>A
Reference -
DB-ID TSC2_000171
dbSNP ID rs201916931
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00017
Allele Count 1
Allele Number 5752
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSC2 NM_000548.3 ?/? - c.5305C>A r.(?) p.(His1769Asn)
TSC2 NM_001077183.1 ?/? - c.5104C>A r.(?) p.(His1702Asn)
TSC2 NM_001114382.1 ?/? - c.5236C>A r.(?) p.(His1746Asn)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000000984 DNA SEQ-NG-I 1 - 7 Despoina Kalfakakou