Genomic variant #0000024000

Individual ID 00017422
Chromosome 22
Allele Parent #2
Affects function (as reported) Probably does not affect function
Affects function (by curator) Probably does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.29092870C>T
Reference -
DB-ID CHEK2_000047 See all 2 reported entries
dbSNP ID rs200020484
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00034
Allele Count 2
Allele Number 5800
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CHEK2 NM_001005735.1 -?/-? - c.1224+19G>A r.(=) p.(=)
CHEK2 NM_001257387.1 -?/-? - c.432+19G>A r.(=) p.(=)
CHEK2 NM_007194.3 -?/-? - c.1095+19G>A r.(=) p.(=)
CHEK2 NM_145862.2 -?/-? - c.1009-1009G>A r.(=) p.(=)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000001078 DNA SEQ-NG-I 1 - 9 Despoina Kalfakakou