Genomic variant #0000025318

Individual ID 00017562
Chromosome 9
Allele Parent #2
Affects function (as reported) Probably does not affect function
Affects function (by curator) Probably does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.98209326A>G
Reference -
DB-ID PTCH1_000086 See all 2 reported entries
dbSNP ID rs139086753
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00035
Allele Count 2
Allele Number 5752
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PTCH1 NM_000264.3 -?/-? - c.4212T>C r.(=) p.(=)
PTCH1 NM_001083602.1 -?/-? - c.4014T>C r.(=) p.(=)
PTCH1 NM_001083603.1 -?/-? - c.4209T>C r.(=) p.(=)
PTCH1 NM_001083604.1 -?/-? - c.3759T>C r.(=) p.(=)
PTCH1 NM_001083605.1 -?/-? - c.3759T>C r.(=) p.(=)
PTCH1 NM_001083606.1 -?/-? - c.3759T>C r.(=) p.(=)
PTCH1 NM_001083607.1 -?/-? - c.3759T>C r.(=) p.(=)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000001232 DNA SEQ-NG-I 1 - 10 Despoina Kalfakakou