Genomic variant #0000027196

Individual ID 00020620
Chromosome 1
Allele Parent #2
Affects function (as reported) Probably does not affect function
Affects function (by curator) Probably does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.45797846G>A
Reference -
DB-ID MUTYH_000014 See all 4 reported entries
dbSNP ID rs138089183
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00068
Allele Count 4
Allele Number 5858
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
MUTYH NM_001048171.1 -?/-? - c.883C>T r.(?) p.(Arg295Cys)
MUTYH NM_001048172.1 -?/-? - c.844C>T r.(?) p.(Arg282Cys)
MUTYH NM_001048173.1 -?/-? - c.841C>T r.(?) p.(Arg281Cys)
MUTYH NM_001048174.1 -?/-? - c.841C>T r.(?) p.(Arg281Cys)
MUTYH NM_001128425.1 -?/-? - c.925C>T r.(?) p.(Arg309Cys)
MUTYH NM_012222.2 -?/-? - c.916C>T r.(?) p.(Arg306Cys)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000001400 DNA SEQ-NG-I 1 - 10 Despoina Kalfakakou