Genomic variant #0000039886

Individual ID 00021984
Chromosome 16
Allele Parent #2
Affects function (as reported) Probably does not affect function
Affects function (by curator) Probably does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.2130197C>T
Reference -
DB-ID TSC2_000319
dbSNP ID rs45487691
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00017
Allele Count 1
Allele Number 5752
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSC2 NM_000548.3 -?/-? - c.3429C>T r.(=) p.(=)
TSC2 NM_001077183.1 -?/-? - c.3297C>T r.(=) p.(=)
TSC2 NM_001114382.1 -?/-? - c.3429C>T r.(=) p.(=)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000006997 DNA SEQ-NG-I 1 - 12 Despoina Kalfakakou