Genomic variant #0000040175

Individual ID 00022008
Chromosome 16
Allele Parent #2
Affects function (as reported) Probably does not affect function
Affects function (by curator) Probably does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.2127595A>G
Reference -
DB-ID TSC2_000058 See all 5 reported entries
dbSNP ID rs45517272
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00087
Allele Count 5
Allele Number 5752
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSC2 NM_000548.3 -?/-? - c.2838-4A>G r.spl? p.?
TSC2 NM_001077183.1 -?/-? - c.2837+1009A>G r.(=) p.(=)
TSC2 NM_001114382.1 -?/-? - c.2838-4A>G r.spl? p.?



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000007022 DNA SEQ-NG-I 1 - 10 Despoina Kalfakakou