Genomic variant #0000027555

Individual ID 00020206
Chromosome 2
Allele Parent #2
Affects function (as reported) Probably does not affect function
Affects function (by curator) Probably does not affect function
DNA change (genomic) (Relative to hg19 / GRCh37) g.48010648T>G
Reference -
DB-ID MSH6_000065 See all 3 reported entries
dbSNP ID rs1450747755
Variant remarks -
Genetic origin Germline
Segregation -
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.00052
Allele Count 3
Allele Number 5762
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
MSH6 NM_000179.2 -?/-? - c.260+16T>G r.(=) p.(=)
MSH6 NM_001281492.1 -?/-? - c.237+39T>G r.(=) p.(=)
MSH6 NM_001281493.1 -?/-? - c.-477+16T>G r.(=) p.(=)
MSH6 NM_001281494.1 -?/-? - c.-1239T>G r.(=) p.(=)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000001434 DNA SEQ-NG-I 1 - 14 Despoina Kalfakakou