Genomic variant #0000036836

Individual ID 00015349
Chromosome 17
Allele Maternal (inferred)
Affects function (as reported) Affects function
Affects function (by curator) Affects function
DNA change (genomic) (Relative to hg19 / GRCh37) g.41246040_41246044del
Reference -
DB-ID BRCA1_000082 See all 9 reported entries
dbSNP ID rs80357888
Variant remarks -
Genetic origin Germline
Segregation ?
Also Known As -
Is Greek Founder -
Geographic Origin (for founder variants) -
Average frequency (large NGS studies) Variant not found in online data sets
Average frequency in greek population 0.0003
Allele Count 2
Allele Number 6768
Owner Despoina Kalfakakou
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
BRCA1 NM_007294.3 +/+ - c.1504_1508del r.(?) p.(Leu502Alafs*2)
BRCA1 NM_007297.3 +/+ - c.1363_1367del r.(?) p.(Leu455Alafs*2)
BRCA1 NM_007298.3 +/+ - c.787+717_787+721del r.(=) p.(=)
BRCA1 NM_007299.3 +/+ - c.787+717_787+721del r.(=) p.(=)
BRCA1 NM_007300.3 +/+ - c.1504_1508del r.(?) p.(Leu502Alafs*2)



Screenings


AscendingScreening ID     

Template     

Technique     

Type     

Genes screened     

Variants found     

Owner     
0000004658 DNA SEQ 0 BRCA1 1 Despoina Kalfakakou